| Ident. | Authors (with country if any) | Title |
|---|
| 000307 (2020) |
Moncef Boulila [Tunisie] ; Abdelaleim Ismail Elsayed [Égypte] ; Mohammed Suhail Rafudeen [Afrique du Sud] ; Ahmad Alsayed Omar [Égypte, États-Unis] | Investigating molecular evolutionary forces and phylogenetic relationships among melatonin precursor-encoding genes of different plant species. |
| 000640 (2019) |
Yongzhi Yang [République populaire de Chine] ; Ying Li [République populaire de Chine] ; Qiao Chen [République populaire de Chine] ; Yongshuai Sun [République populaire de Chine] ; Zhiqiang Lu [République populaire de Chine] | WGDdetector: a pipeline for detecting whole genome duplication events using the genome or transcriptome annotations. |
| 000872 (2019) |
Yunpeng Cao [République populaire de Chine] ; Xiaoxu Li [République populaire de Chine] ; Lan Jiang [République populaire de Chine] | Integrative Analysis of the Core Fruit Lignification Toolbox in Pear Reveals Targets for Fruit Quality Bioengineering. |
| 000932 (2019) |
Shenquan Cao [République populaire de Chine] ; Mengjie Guo [République populaire de Chine] ; Chong Wang [République populaire de Chine] ; Wenjing Xu [République populaire de Chine] ; Tianyuan Shi [République populaire de Chine] ; Guimin Tong [République populaire de Chine] ; Cheng Zhen [République populaire de Chine] ; Hao Cheng [République populaire de Chine] ; Chuanping Yang [République populaire de Chine] ; Nabil Ibrahim Elsheery [Égypte] ; Yuxiang Cheng [République populaire de Chine] | Genome-wide characterization of aspartic protease (AP) gene family in Populus trichocarpa and identification of the potential PtAPs involved in wood formation. |
| 000968 (2019) |
Y. Osako [Japon] ; N. Takata [Japon] ; Nuoendagula [Japon] ; S. Ishikawa [Japon] ; T. Umezawa [Japon] ; T. Taniguchi [Japon] ; S. Kajita [Japon] | Expression analysis of cellulose synthases that comprise the Type II complex in hybrid aspen. |
| 000974 (2019) |
Bobin Liu [République populaire de Chine] ; Jianjun Hu [République populaire de Chine] ; Jin Zhang [République populaire de Chine, États-Unis] | Evolutionary Divergence of Duplicated Hsf Genes in Populus. |
| 000977 (2019) |
Jiadai He [République populaire de Chine] ; Hua Zhao [République populaire de Chine] ; Zhilu Cheng [République populaire de Chine] ; Yuwei Ke [République populaire de Chine] ; Jiaxi Liu [République populaire de Chine] ; Haoli Ma [République populaire de Chine] | Evolution Analysis of the Fasciclin-Like Arabinogalactan Proteins in Plants Shows Variable Fasciclin-AGP Domain Constitutions. |
| 000B86 (2018) |
Yue Zhang ; Chunfang Zheng ; David Sankoff | Evolutionary Model for the Statistical Divergence of Paralogous and Orthologous Gene Pairs Generated by Whole Genome Duplication and Speciation. |
| 000E65 (2018) |
Jin Zhang [États-Unis] ; Yongil Yang [États-Unis] ; Kaijie Zheng [États-Unis] ; Meng Xie [États-Unis] ; Kai Feng [États-Unis] ; Sara S. Jawdy [États-Unis] ; Lee E. Gunter [États-Unis] ; Priya Ranjan [États-Unis] ; Vasanth R. Singan [États-Unis] ; Nancy Engle [États-Unis] ; Erika Lindquist [États-Unis] ; Kerrie Barry [États-Unis] ; Jeremy Schmutz [États-Unis] ; Nan Zhao [États-Unis] ; Timothy J. Tschaplinski [États-Unis] ; Jared Leboldus [États-Unis] ; Gerald A. Tuskan [États-Unis] ; Jin-Gui Chen [États-Unis] ; Wellington Muchero [États-Unis] | Genome-wide association studies and expression-based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense-responsive transcription factors in Populus. |
| 000E70 (2018) |
Haibo Wang [République populaire de Chine] ; Ming Gong [République populaire de Chine] ; Junyun Guo [République populaire de Chine] ; Hu Xin [République populaire de Chine] ; Yong Gao [République populaire de Chine] ; Chao Liu [République populaire de Chine] ; Dongqin Dai [République populaire de Chine] ; Lizhou Tang [République populaire de Chine] | Genome-wide Identification of Jatropha curcas MAPK, MAPKK, and MAPKKK Gene Families and Their Expression Profile Under Cold Stress. |
| 000F10 (2018) |
Xing Liu [République populaire de Chine] ; Zhichao Sun [République populaire de Chine] ; Wei Dong [République populaire de Chine] ; Zhengjia Wang [République populaire de Chine] ; Liangsheng Zhang [République populaire de Chine] | Expansion and Functional Divergence of the SHORT VEGETATIVE PHASE (SVP) Genes in Eudicots. |
| 000F13 (2018) |
Bei Gao [République populaire de Chine] ; Moxian Chen [République populaire de Chine] ; Xiaoshuang Li [République populaire de Chine] ; Yuqing Liang [République populaire de Chine] ; Fuyuan Zhu [République populaire de Chine] ; Tieyuan Liu [République populaire de Chine] ; Daoyuan Zhang [République populaire de Chine] ; Andrew J. Wood [États-Unis] ; Melvin J. Oliver [États-Unis] ; Jianhua Zhang [République populaire de Chine] | Evolution by duplication: paleopolyploidy events in plants reconstructed by deciphering the evolutionary history of VOZ transcription factors. |
| 000F83 (2018) |
Jianbo Xie [République populaire de Chine] ; Kecheng Qian [République populaire de Chine] ; Jingna Si [République populaire de Chine] ; Liang Xiao [République populaire de Chine] ; Dong Ci [République populaire de Chine] ; Deqiang Zhang [République populaire de Chine] | Conserved noncoding sequences conserve biological networks and influence genome evolution. |
| 001272 (2017) |
Zhi Zou [République populaire de Chine] ; Guishui Xie [République populaire de Chine] ; Lifu Yang [République populaire de Chine] | Papain-like cysteine protease encoding genes in rubber (Hevea brasiliensis): comparative genomics, phylogenetic, and transcriptional profiling analysis. |
| 001364 (2017) |
Ertugrul Filiz [Turquie] ; Recep Vatansever [Turquie] ; Ibrahim Ilker Ozyigit [Turquie] ; Mehmet Emin Uras [Turquie] ; Ugur Sen [Turquie] ; Naser A. Anjum [Portugal] ; Eduarda Pereira [Portugal] | Genome-wide identification and expression profiling of EIL gene family in woody plant representative poplar (Populus trichocarpa). |
| 001370 (2017) |
Nannan Li [République populaire de Chine] ; Hongjun Meng [République populaire de Chine] ; Haitao Xing [République populaire de Chine] ; Lan Liang [République populaire de Chine] ; Xin Zhao [République populaire de Chine] ; Keming Luo [République populaire de Chine] | Genome-wide analysis of MATE transporters and molecular characterization of aluminum resistance in Populus. |
| 001392 (2017) |
Fengxia Tian [République populaire de Chine] ; Ermei Chang [République populaire de Chine] ; Yu Li [République populaire de Chine] ; Pei Sun [République populaire de Chine] ; Jianjun Hu [République populaire de Chine] ; Jin Zhang [Oman] | Expression and integrated network analyses revealed functional divergence of NHX-type Na+/H+ exchanger genes in poplar. |
| 001483 (2017) |
Nan Chao [République populaire de Chine] ; Ning Li [République populaire de Chine] ; Qi Qi [République populaire de Chine] ; Shuang Li [République populaire de Chine] ; Tong Lv [République populaire de Chine] ; Xiang-Ning Jiang [République populaire de Chine] ; Ying Gai [République populaire de Chine] | Characterization of the cinnamoyl-CoA reductase (CCR) gene family in Populus tomentosa reveals the enzymatic active sites and evolution of CCR. |
| 001542 (2017) |
Jianbo Xie [République populaire de Chine] ; Xiaohui Yang [République populaire de Chine] ; Yuepeng Song [République populaire de Chine] ; Qingzhang Du [République populaire de Chine] ; Ying Li [République populaire de Chine] ; Jinhui Chen [République populaire de Chine] ; Deqiang Zhang [République populaire de Chine] | Adaptive evolution and functional innovation of Populus-specific recently evolved microRNAs. |
| 001826 (2016) |
Huibin Han [République populaire de Chine] ; Guohua Zhang [République populaire de Chine] ; Mengyao Wu [République populaire de Chine] ; Guodong Wang [République populaire de Chine] | Identification and characterization of the Populus trichocarpa CLE family. |
| 001872 (2016) |
François Héricourt [France] ; Françoise Chefdor [France] ; Inès Djeghdir [France] ; Mélanie Larcher [France] ; Florent Lafontaine [France] ; Vincent Courdavault [France] ; Daniel Auguin [France] ; Franck Coste [France] ; Christiane Depierreux [France] ; Mirai Tanigawa [Japon] ; Tatsuya Maeda [Japon] ; Gaëlle Glévarec [France] ; Sabine Carpin [France] | Functional Divergence of Poplar Histidine-Aspartate Kinase HK1 Paralogs in Response to Osmotic Stress. |
| 001953 (2016) |
Zhanchao Wang [République populaire de Chine] ; Quangang Liu [République populaire de Chine] ; Hanzeng Wang [République populaire de Chine] ; Haizhen Zhang [République populaire de Chine] ; Xuemei Xu [République populaire de Chine] ; Chenghao Li [République populaire de Chine] ; Chuanping Yang [République populaire de Chine] | Comprehensive analysis of trihelix genes and their expression under biotic and abiotic stresses in Populus trichocarpa. |
| 001B88 (2015) |
Qingzhang Du [République populaire de Chine] ; Lu Wang ; Xiaohui Yang ; Chenrui Gong ; Deqiang Zhang | Populus endo-β-1,4-glucanases gene family: genomic organization, phylogenetic analysis, expression profiles and association mapping. |
| 001C73 (2015) |
Florent Murat [France] ; Rongzhi Zhang [France] ; Sébastien Guizard [France] ; Haris Gavranovi [Bosnie-Herzégovine] ; Raphael Flores [France] ; Delphine Steinbach [France] ; Hadi Quesneville [France] ; Eric Tannier [France] ; Jérôme Salse [France] | Karyotype and gene order evolution from reconstructed extinct ancestors highlight contrasts in genome plasticity of modern rosid crops. |
| 001D05 (2015) |
Jin Zhang [République populaire de Chine] ; Bobin Liu [République populaire de Chine] ; Jianbo Li [République populaire de Chine] ; Li Zhang [République populaire de Chine] ; Yan Wang [République populaire de Chine] ; Huanquan Zheng [Canada] ; Mengzhu Lu [République populaire de Chine] ; Jun Chen [République populaire de Chine] | Hsf and Hsp gene families in Populus: genome-wide identification, organization and correlated expression during development and in stress responses. |
| 001D34 (2015) |
Haizhen Zhang [République populaire de Chine] ; Jingli Yang [République populaire de Chine] ; Weida Wang [République populaire de Chine] ; Dandan Li [République populaire de Chine] ; Xiaoqing Hu [République populaire de Chine] ; Han Wang [République populaire de Chine] ; Ming Wei [République populaire de Chine] ; Quangang Liu [République populaire de Chine] ; Zhanchao Wang [République populaire de Chine] ; Chenghao Li [République populaire de Chine] | Genome-wide identification and expression profiling of the copper transporter gene family in Populus trichocarpa. |
| 001D71 (2015) |
Naoki Takata [Japon] ; Toru Taniguchi | Expression divergence of cellulose synthase (CesA) genes after a recent whole genome duplication event in Populus. |
| 001D72 (2015) |
Wei Sun [République populaire de Chine] ; Hao Chen ; Juan Wang ; Hong Wei Sun ; Shu Ke Yang ; Ya Lin Sang ; Xing Bo Lu ; Xiao Hui Xu | Expression analysis of genes encoding mitogen-activated protein kinases in maize provides a key link between abiotic stress signaling and plant reproduction. |
| 001D84 (2015) |
Shu-Dong Zhang [République populaire de Chine] ; Li-Zhen Ling [République populaire de Chine] ; Ting-Shuang Yi [République populaire de Chine] | Evolution and divergence of SBP-box genes in land plants. |
| 001F02 (2015) |
Feng-Xia Tian [République populaire de Chine] ; Jian-Lei Zang [République populaire de Chine] ; Tan Wang [République populaire de Chine] ; Yu-Li Xie [République populaire de Chine] ; Jin Zhang [République populaire de Chine] ; Jian-Jun Hu [République populaire de Chine] | Aldehyde Dehydrogenase Gene Superfamily in Populus: Organization and Expression Divergence between Paralogous Gene Pairs. |
| 001F69 (2014) |
Bobin Liu ; Lin Wang ; Jin Zhang ; Jianbo Li ; Huanquan Zheng ; Jun Chen [République populaire de Chine] ; Mengzhu Lu | WUSCHEL-related Homeobox genes in Populus tomentosa: diversified expression patterns and a functional similarity in adventitious root formation. |
| 001F82 (2014) |
Olivier Garsmeur [France] ; James C. Schnable ; Ana Almeida ; Cyril Jourda ; Angélique D'Hont ; Michael Freeling | Two evolutionarily distinct classes of paleopolyploidy. |
| 002000 (2014) |
Xiaogang Dai [République populaire de Chine] ; Quanjun Hu [République populaire de Chine] ; Qingle Cai [République populaire de Chine] ; Kai Feng [République populaire de Chine] ; Ning Ye [République populaire de Chine] ; Gerald A. Tuskan [États-Unis] ; Richard Milne [Royaume-Uni] ; Yingnan Chen [République populaire de Chine] ; Zhibing Wan [République populaire de Chine] ; Zefu Wang [République populaire de Chine] ; Wenchun Luo [République populaire de Chine] ; Kun Wang [République populaire de Chine] ; Dongshi Wan [République populaire de Chine] ; Mingxiu Wang [République populaire de Chine] ; Jun Wang [République populaire de Chine] ; Jianquan Liu [République populaire de Chine] ; Tongming Yin [République populaire de Chine] | The willow genome and divergent evolution from poplar after the common genome duplication. |
| 002022 (2014) |
Montserrat Saladié [Espagne] ; Louwrance P. Wright [Allemagne] ; Jordi Garcia-Mas [Espagne] ; Manuel Rodriguez-Concepcion [Espagne] ; Michael A. Phillips [Espagne] | The 2-C-methylerythritol 4-phosphate pathway in melon is regulated by specialized isoforms for the first and last steps. |
| 002043 (2014) |
Wei Li [République populaire de Chine] ; Wei Liu [République populaire de Chine] ; Hengling Wei [République populaire de Chine] ; Qiuling He [République populaire de Chine] ; Jinhong Chen [République populaire de Chine] ; Baohong Zhang [États-Unis] ; Shuijin Zhu [République populaire de Chine] | Species-specific expansion and molecular evolution of the 3-hydroxy-3-methylglutaryl coenzyme A reductase (HMGR) gene family in plants. |
| 002080 (2014) |
Guohua Chai [République populaire de Chine] ; Zengguang Wang [République populaire de Chine] ; Xianfeng Tang [République populaire de Chine] ; Li Yu [République populaire de Chine] ; Guang Qi [République populaire de Chine] ; Dian Wang [République populaire de Chine] ; Xiaofei Yan [République populaire de Chine] ; Yingzhen Kong [République populaire de Chine] ; Gongke Zhou [République populaire de Chine] | R2R3-MYB gene pairs in Populus: evolution and contribution to secondary wall formation and flowering time. |
| 002085 (2014) |
Liangliang Yu [République populaire de Chine] ; Hongpeng Chen [République populaire de Chine] ; Jiayan Sun [République populaire de Chine] ; Laigeng Li [République populaire de Chine] | PtrKOR1 is required for secondary cell wall cellulose biosynthesis in Populus. |
| 002094 (2014) |
Luke M. Evans [États-Unis] ; Gancho T. Slavov [Royaume-Uni] ; Eli Rodgers-Melnick [États-Unis] ; Joel Martin [États-Unis] ; Priya Ranjan [États-Unis] ; Wellington Muchero [États-Unis] ; Amy M. Brunner [États-Unis] ; Wendy Schackwitz [États-Unis] ; Lee Gunter [États-Unis] ; Jin-Gui Chen [États-Unis] ; Gerald A. Tuskan [États-Unis] ; Stephen P. Difazio [États-Unis] | Population genomics of Populus trichocarpa identifies signatures of selection and adaptive trait associations. |
| 002166 (2014) |
Hang-Yong Zhu [République populaire de Chine] ; Chun-Ming Li [République populaire de Chine] ; Li-Feng Wang [République populaire de Chine] ; Hui Bai [République populaire de Chine] ; Yan-Ping Li [République populaire de Chine] ; Wen-Xi Yu [République populaire de Chine] ; De-An Xia [République populaire de Chine] ; Chang-Cai Liu [République populaire de Chine] | In silico identification and characterization of N-Terminal acetyltransferase genes of poplar (Populus trichocarpa). |
| 002205 (2014) |
Hui Ma [République populaire de Chine] ; Lin Feng [République populaire de Chine] ; Zhu Chen [République populaire de Chine] ; Xue Chen [République populaire de Chine] ; Hualin Zhao [République populaire de Chine] ; Yan Xiang [République populaire de Chine] | Genome-wide identification and expression analysis of the IQD gene family in Populus trichocarpa. |
| 002207 (2014) |
Panpan Zhao [République populaire de Chine] ; Qiang Li ; Jing Li ; Lina Wang ; Zhonghai Ren | Genome-wide identification and characterization of R2R3MYB family in Solanum lycopersicum. |
| 002208 (2014) |
Daohua He [République populaire de Chine] ; Zhongping Lei [République populaire de Chine] ; Hongyi Xing [République populaire de Chine] ; Baoshan Tang [République populaire de Chine] | Genome-wide identification and analysis of the aldehyde dehydrogenase (ALDH) gene superfamily of Gossypium raimondii. |
| 002209 (2014) |
Jun Wang ; Na Sun ; Ting Deng ; Lida Zhang [République populaire de Chine] ; Kaijing Zuo | Genome-wide cloning, identification, classification and functional analysis of cotton heat shock transcription factors in cotton (Gossypium hirsutum). |
| 002342 (2014) |
Mehanathan Muthamilarasan [Inde] ; Venkata Suresh Bonthala ; Awdhesh Kumar Mishra ; Rohit Khandelwal ; Yusuf Khan ; Riti Roy ; Manoj Prasad | C2H2 type of zinc finger transcription factors in foxtail millet define response to abiotic stresses. |
| 002414 (2013) |
Zhi-Xiang Liu [République populaire de Chine] ; Chao-Zhen Zeng [République populaire de Chine] ; Xiao-Feng Tan [République populaire de Chine] | [Molecular evolution of the poplar MIR169 gene family]. |
| 002524 (2013) |
Wen-Kai Jiang [République populaire de Chine] ; Yun-Long Liu ; En-Hua Xia ; Li-Zhi Gao | Prevalent role of gene features in determining evolutionary fates of whole-genome duplication duplicated genes in flowering plants. |
| 002527 (2013) |
Eli Rodgers-Melnick [États-Unis] ; Mark Culp ; Stephen P. Difazio | Predicting whole genome protein interaction networks from primary sequence data in model and non-model organisms using ENTS. |
| 002668 (2013) |
Ran Zuo [République populaire de Chine] ; Ruibo Hu ; Guohua Chai ; Meiling Xu ; Guang Qi ; Yingzhen Kong ; Gongke Zhou | Genome-wide identification, classification, and expression analysis of CDPK and its closely related gene families in poplar (Populus trichocarpa). |
| 002669 (2013) |
Yanjun Zan [République populaire de Chine] ; Yan Ji ; Yu Zhang ; Shaohui Yang ; Yingjin Song ; Jiehua Wang | Genome-wide identification, characterization and expression analysis of populus leucine-rich repeat receptor-like protein kinase genes. |
| 002673 (2013) |
Jin Zhang [République populaire de Chine] ; Jianbo Li ; Bobin Liu ; Li Zhang ; Jun Chen ; Mengzhu Lu | Genome-wide analysis of the Populus Hsp90 gene family reveals differential expression patterns, localization, and heat stress responses. |
| 002685 (2013) |
Xiao Lin [République populaire de Chine] ; Yu Zhang ; Hanhui Kuang ; Jiongjiong Chen | Frequent loss of lineages and deficient duplications accounted for low copy number of disease resistance genes in Cucurbitaceae. |
